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  5. Potri.016G085300

Potri.016G085300


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0004570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004570_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.016G085300
Cluster HCCA clusters: cluster_0035

Target Alias Description ECC score Gene Family Method Actions
Mp1g13160.1 No alias HCF152 plastidial RNA transcript stability factor 0.02 Orthogroups_2024-Update
PSME_00045169-RA No alias (at3g09650 : 467.0) RNA binding protein involved in the... 0.04 Orthogroups_2024-Update
Sopen09g002180 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen09g002200 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 422 452
IPR002885 Pentatricopeptide_repeat 566 611
IPR002885 Pentatricopeptide_repeat 225 273
IPR002885 Pentatricopeptide_repeat 459 506
IPR002885 Pentatricopeptide_repeat 532 559
IPR002885 Pentatricopeptide_repeat 389 414
No external refs found!