Potri.016G091600

Description : ATPase, AAA-type, CDC48 protein

Gene families : OG_42_0000328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.016G091600
Cluster	HCCA clusters: cluster_0024

Target	Alias	Description	ECC score	Gene Family Method
At3g01610	No alias	Cell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]	0.02	Orthogroups_2024-Update
LOC_Os03g05730	No alias	cell division control protein 48 homolog E, putative, expressed	0.02	Orthogroups_2024-Update
Mp1g25630.1	No alias	platform ATPase (CDC48)	0.03	Orthogroups_2024-Update
Pp1s115_6V6	No alias	transitional endoplasmic reticulum	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	245	374
IPR003959	ATPase_AAA_core	518	651
IPR003338	CDC4_N-term_subdom	30	111
IPR004201	Cdc48_dom2	132	195

External Links

No external refs found!