Potri.017G037200

Description : Arabidopsis thaliana protein of unknown function (DUF794)

Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.017G037200
Cluster	HCCA clusters: cluster_0144

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g56890	No alias	Arabidopsis thaliana protein of unknown function (DUF794)	0.02	Orthogroups_2024-Update
Bradi5g21780	No alias	Arabidopsis thaliana protein of unknown function (DUF794)	0.03	Orthogroups_2024-Update
HORVU2Hr1G098680.2	No alias	organelle RNA splicing factor *(APO)	0.04	Orthogroups_2024-Update
PSME_00004747-RA	No alias	(at5g61930 : 320.0) ACCUMULATION OF PHOTOSYSTEM ONE 3;...	0.02	Orthogroups_2024-Update
PSME_00015410-RA	No alias	(at5g61930 : 368.0) ACCUMULATION OF PHOTOSYSTEM ONE 3;...	0.02	Orthogroups_2024-Update
Sobic.006G214700.1	No alias	organelle RNA splicing factor *(APO)	0.03	Orthogroups_2024-Update
Solyc09g009400	No alias	APO protein 3, mitochondrial, putative (AHRD V3.3 ***...	0.05	Orthogroups_2024-Update
Sopen08g028600	No alias	APO RNA-binding	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	28	168
IPR023342	APO_dom	196	311

External Links

No external refs found!