1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.017G039800

Potri.017G039800


Description : AGAMOUS-like 62


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.017G039800
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
A4A49_15806 No alias developmental protein sepallata 1 0.04 Orthogroups_2024-Update
At4g09960 No alias K-box region and MADS-box transcription factor family... 0.03 Orthogroups_2024-Update
Brara.C04645.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H01578.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I03027.1 No alias regulatory protein *(SEPALLATA) of floral meristem... 0.03 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.09G266400 No alias AGAMOUS-like 6 0.04 Orthogroups_2024-Update
Glyma.20G136700 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.007G087500 No alias AGAMOUS-like 66 0.04 Orthogroups_2024-Update
Potri.010G154100 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Pp1s209_130V6 No alias mads-box transcription factor 0.02 Orthogroups_2024-Update
Pp1s81_202V6 No alias mads box 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 21 68
No external refs found!