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  5. Sopen12g028970

Sopen12g028970


Description : Ring finger domain


Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g028970
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Bradi2g34010 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g51535 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G065230.2 No alias E3 ubiquitin ligase *(RIE1) 0.02 Orthogroups_2024-Update
Mp2g06960.1 No alias RING-H2-class E3 ligase 0.02 Orthogroups_2024-Update
Seita.7G203100.1 No alias E3 ubiquitin ligase *(RIE1) 0.04 Orthogroups_2024-Update
Sobic.009G065200.1 No alias E3 ubiquitin ligase *(DRR1) 0.04 Orthogroups_2024-Update
Solyc12g056400 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G61180.1) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 299 341
No external refs found!