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  5. Potri.017G067000

Potri.017G067000


Description : cyclic nucleotide-gated channel 16


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.017G067000
Cluster HCCA clusters: cluster_0188

Target Alias Description ECC score Gene Family Method Actions
At5g14870 No alias Cyclic nucleotide-gated ion channel 18... 0.03 Orthogroups_2024-Update
At5g53130 No alias Cyclic nucleotide-gated ion channel 1... 0.03 Orthogroups_2024-Update
GRMZM2G074317 No alias Cyclic nucleotide-regulated ion channel family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G018730.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Pp1s204_120V6 No alias MKP6.28; cyclic nucleotide-binding transporter 1 / CNBT1... 0.02 Orthogroups_2024-Update
Sopen02g033280 No alias Cyclic nucleotide-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 42 366
IPR000595 cNMP-bd_dom 462 549
No external refs found!