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  5. Potri.017G093300

Potri.017G093300


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0004261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.017G093300
Cluster HCCA clusters: cluster_0009

Target Alias Description ECC score Gene Family Method Actions
Bradi1g22300 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Orthogroups_2024-Update
Cre17.g710100 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G050501 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G029400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Mp3g03210.1 No alias component WDR12 of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.02 Orthogroups_2024-Update
Seita.2G380200.1 No alias component *(WDR12) of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.08 Orthogroups_2024-Update
Sobic.002G365900.1 No alias component *(WDR12) of ribosome PES-BOP1-WDR12 (PeBoW) complex 0.08 Orthogroups_2024-Update
Sopen01g053090 No alias WD domain, G-beta repeat 0.07 Orthogroups_2024-Update
Sopen02g033500 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update
evm.model.tig00021428.5 No alias (at5g15550 : 166.0) Transducin/WD40 repeat-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 354 391
IPR001680 WD40_repeat 144 186
IPR001680 WD40_repeat 269 303
IPR001680 WD40_repeat 203 236
IPR012972 NLE 16 83
No external refs found!