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  5. Sopen12g029700

Sopen12g029700


Description : FAD binding domain of DNA photolyase


Gene families : OG_42_0001675 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g029700
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
92414 No alias cryptochrome 2 0.03 Orthogroups_2024-Update
At1g04400 No alias Cryptochrome-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96524] 0.03 Orthogroups_2024-Update
Bradi3g49204 No alias cryptochrome 2 0.02 Orthogroups_2024-Update
Brara.I02459.1 No alias cryptochrome photoreceptor *(CRY) 0.05 Orthogroups_2024-Update
Cre06.g295200 No alias cryptochrome 1 0.01 Orthogroups_2024-Update
GRMZM2G024739 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
GRMZM2G104262 No alias cryptochrome 1 0.04 Orthogroups_2024-Update
Glyma.13G089200 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
Glyma.14G174200 No alias cryptochrome 1 0.03 Orthogroups_2024-Update
MA_10428291g0010 No alias (at4g08920 : 867.0) Encodes CRY1, a flavin-type... 0.02 Orthogroups_2024-Update
Seita.1G204600.1 No alias cryptochrome photoreceptor *(CRY) 0.03 Orthogroups_2024-Update
Sobic.004G188400.1 No alias cryptochrome photoreceptor *(CRY) 0.04 Orthogroups_2024-Update
Solyc04g074180 No alias cryptochrome 1 0.04 Orthogroups_2024-Update
Solyc12g057040 No alias cryptochrome 1b 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020978 Cryptochrome_C 512 580
IPR006050 DNA_photolyase_N 7 163
IPR005101 Cryptochr/Photolyase_FAD-bd 283 481
No external refs found!