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  5. Potri.017G133400

Potri.017G133400


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.017G133400
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
At5g60960 No alias PNM1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8V9] 0.07 Orthogroups_2024-Update
Bradi1g22060 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G162500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G225100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G032910.2 No alias component *(mL104) of large mitoribosomal-subunit... 0.03 Orthogroups_2024-Update
LOC_Os07g41260 No alias PPR repeat domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.2G382300.1 No alias component *(mL104) of large mitoribosomal-subunit... 0.06 Orthogroups_2024-Update
Solyc03g114920 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen03g034000 No alias PPR repeat family 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 247 272
IPR002885 Pentatricopeptide_repeat 177 201
IPR002885 Pentatricopeptide_repeat 318 364
IPR002885 Pentatricopeptide_repeat 405 434
No external refs found!