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  5. Potri.017G137200

Potri.017G137200


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.017G137200
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
A4A49_17130 No alias pentatricopeptide repeat-containing protein dot4, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_19306 No alias pentatricopeptide repeat-containing protein,... 0.05 Orthogroups_2024-Update
At1g13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein... 0.03 Orthogroups_2024-Update
At1g20230 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 Orthogroups_2024-Update
At2g29760 No alias Pentatricopeptide repeat-containing protein At2g29760,... 0.03 Orthogroups_2024-Update
At4g02750 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Orthogroups_2024-Update
At5g39350 No alias Pentatricopeptide repeat-containing protein At5g39350... 0.03 Orthogroups_2024-Update
Bradi1g47170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g53140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g53377 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g62180 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g47510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g48960 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi4g30190 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Bradi4g33270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G001466 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G019689 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G020008 No alias mitochondrial RNAediting factor 1 0.05 Orthogroups_2024-Update
GRMZM2G031588 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G060337 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G073017 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G098869 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G129783 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G144071 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G158839 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G163396 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G331779 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G430710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G456114 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G474929 No alias mitochondrial editing factor 21 0.04 Orthogroups_2024-Update
GRMZM5G862936 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G159100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G144100 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G007000 No alias mitochondrial editing factor 22 0.02 Orthogroups_2024-Update
Glyma.04G057300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G127500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G026400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G125500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G168800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G016600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G273200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G049100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G161800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G175800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G209700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G030840.1 No alias RNA editing factor *(MEF29) 0.02 Orthogroups_2024-Update
HORVU7Hr1G051030.9 No alias RNA editing factor *(REME1) 0.02 Orthogroups_2024-Update
HORVU7Hr1G111860.1 No alias Unknown function 0.01 Orthogroups_2024-Update
LOC_Os01g72930 No alias pentatricopeptide, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g43430 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g08140 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
MA_10429371g0010 No alias (at3g57430 : 716.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
MA_110g0010 No alias (at4g02750 : 501.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
MA_118886g0010 No alias (at2g22070 : 615.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
MA_123466g0010 No alias (at3g57430 : 553.0) Encodes a chloroplast RNA editing... 0.02 Orthogroups_2024-Update
MA_141034g0010 No alias (at4g33170 : 601.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_183738g0010 No alias (at3g12770 : 617.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
MA_3471g0010 No alias (at4g13650 : 601.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
MA_442926g0010 No alias (at4g13650 : 697.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_472579g0010 No alias (at4g33170 : 615.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_50118g0010 No alias (at3g03580 : 671.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_61422g0020 No alias (at4g13650 : 721.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_6329g0010 No alias (at4g02750 : 542.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_656915g0010 No alias (at4g18750 : 657.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
MA_658463g0010 No alias (at4g02750 : 623.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
MA_74986g0020 No alias (at4g02750 : 590.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
MA_9258g0010 No alias (at4g13650 : 664.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00022741-RA No alias (at4g18750 : 598.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00026228-RA No alias (at3g57430 : 606.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
PSME_00051698-RA No alias (at3g57430 : 715.0) Encodes a chloroplast RNA editing... 0.02 Orthogroups_2024-Update
PSME_00052953-RA No alias (at4g13650 : 635.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
PSME_00055422-RA No alias (at2g13600 : 420.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00056424-RA No alias (at2g22070 : 461.0) pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00057163-RA No alias (at1g11290 : 707.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
Seita.1G076000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G031700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G091900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G177900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G203900.1 No alias RNA editing factor *(OTP87) 0.03 Orthogroups_2024-Update
Seita.3G227100.1 No alias RNA editing factor *(MEF21) 0.01 Orthogroups_2024-Update
Seita.4G100100.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.5G124400.1 No alias RNA editing factor *(OTP81) 0.02 Orthogroups_2024-Update
Seita.5G326600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G051400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G213800.1 No alias RNA editing factor *(DOT4) 0.02 Orthogroups_2024-Update
Seita.7G293800.1 No alias RNA editing factor *(REME2/PGL1) 0.03 Orthogroups_2024-Update
Seita.9G007900.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.9G355700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G477500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G001200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G151300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G312700.1 No alias RNA editing factor *(MEF25) 0.02 Orthogroups_2024-Update
Sobic.001G436600.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G478900.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G200500.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G384800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G336400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G337200.1 No alias RNA editing factor *(MEF10) 0.03 Orthogroups_2024-Update
Sobic.004G199400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G266300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G020000.7 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.006G122100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G137800.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G066900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G179000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G116400.4 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G238700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G250700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G190900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G232700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g006920 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc01g081290 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc01g081560 No alias LOW QUALITY:Pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update
Solyc01g090510 No alias Pentatricopeptide repeat-containing protein, putative... 0.04 Orthogroups_2024-Update
Solyc01g091610 No alias LOW QUALITY:Pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update
Solyc01g094850 No alias Pentatricopeptide repeat superfamily protein, putative... 0.04 Orthogroups_2024-Update
Solyc01g097670 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.07 Orthogroups_2024-Update
Solyc01g112200 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.05 Orthogroups_2024-Update
Solyc02g065030 No alias No description available 0.06 Orthogroups_2024-Update
Solyc03g006990 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc03g007840 No alias Pentatricopeptide repeat-containing protein, putative... 0.04 Orthogroups_2024-Update
Solyc03g063690 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc03g093630 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc03g097850 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc04g064750 No alias Pentatricopeptide repeat superfamily protein (AHRD V3.3... 0.06 Orthogroups_2024-Update
Solyc07g006990 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc07g055310 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.05 Orthogroups_2024-Update
Solyc09g009950 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc09g010070 No alias Pentatricopeptide repeat superfamily protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc09g059580 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g008590 No alias Pentatricopeptide repeat-containing protein, putative... 0.04 Orthogroups_2024-Update
Solyc11g008940 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc11g011860 No alias Pentatricopeptide repeat-containing protein family (AHRD... 0.06 Orthogroups_2024-Update
Solyc11g040060 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g071370 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.05 Orthogroups_2024-Update
Solyc12g042400 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen01g002910 No alias PPR repeat 0.06 Orthogroups_2024-Update
Sopen01g033110 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen01g037380 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen01g038630 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen01g038950 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen01g041280 No alias PPR repeat family 0.07 Orthogroups_2024-Update
Sopen01g054250 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen02g024180 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen02g025050 No alias PPR repeat family 0.05 Orthogroups_2024-Update
Sopen02g033370 No alias PPR repeat family 0.08 Orthogroups_2024-Update
Sopen02g039140 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen03g002990 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen03g003770 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen03g011150 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen03g028590 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen03g029160 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen03g034990 No alias PPR repeat family 0.05 Orthogroups_2024-Update
Sopen03g038010 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen05g018650 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen06g022100 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen06g035950 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen07g022420 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen07g026910 No alias PPR repeat family 0.05 Orthogroups_2024-Update
Sopen09g004700 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen09g031050 No alias PPR repeat 0.03 Orthogroups_2024-Update
Sopen09g033130 No alias PPR repeat family 0.06 Orthogroups_2024-Update
Sopen10g004410 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen11g001900 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen11g001910 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen11g003140 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen11g004720 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen11g006690 No alias PPR repeat 0.04 Orthogroups_2024-Update
Sopen11g009180 No alias PPR repeat 0.02 Orthogroups_2024-Update
Sopen11g024970 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen11g026910 No alias PPR repeat family 0.05 Orthogroups_2024-Update
Sopen11g029050 No alias PPR repeat family 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 141 167
IPR032867 DYW_dom 514 638
IPR002885 Pentatricopeptide_repeat 340 387
IPR002885 Pentatricopeptide_repeat 239 284
No external refs found!