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  5. Sopen12g030490

Sopen12g030490


Description : Cyclin, N-terminal domain


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g030490
Cluster HCCA clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
At1g44110 No alias CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5] 0.03 Orthogroups_2024-Update
At3g11520 No alias Cyclin-B1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q39069] 0.02 Orthogroups_2024-Update
Brara.F03824.1 No alias regulatory protein *(CYCA) of cell cycle 0.02 Orthogroups_2024-Update
Brara.I01033.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Brara.J02241.1 No alias regulatory protein *(CYCA) of cell cycle 0.04 Orthogroups_2024-Update
Cre08.g370401 No alias CYCLIN B2;4 0.01 Orthogroups_2024-Update
Glyma.04G043400 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
Glyma.04G043600 No alias Cyclin A3;1 0.04 Orthogroups_2024-Update
Glyma.04G246600 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
Glyma.13G031500 No alias Cyclin A1;1 0.04 Orthogroups_2024-Update
Glyma.17G204900 No alias mitotic-like cyclin 3B from Arabidopsis 0.03 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.02 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.02 Orthogroups_2024-Update
MA_88982g0010 No alias (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... 0.04 Orthogroups_2024-Update
PSME_00007251-RA No alias (p25011|ccnb1_soybn : 239.0) G2/mitotic-specific cyclin... 0.03 Orthogroups_2024-Update
PSME_00023501-RA No alias (at1g44110 : 356.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.03 Orthogroups_2024-Update
Pp1s147_164V6 No alias n-terminal domain containing expressed 0.03 Orthogroups_2024-Update
Pp1s642_3V6 No alias n-terminal domain containing expressed 0.04 Orthogroups_2024-Update
Seita.4G276600.1 No alias regulatory protein *(CYCA) of cell cycle 0.04 Orthogroups_2024-Update
Seita.4G286400.1 No alias regulatory protein *(CYCB) of cell cycle 0.04 Orthogroups_2024-Update
Sobic.009G181500.1 No alias regulatory protein *(CYCB) of cell cycle 0.06 Orthogroups_2024-Update
Sobic.010G260800.3 No alias regulatory protein *(CYCA) of cell cycle 0.05 Orthogroups_2024-Update
Solyc04g078310 No alias cyclin A3_1 0.03 Orthogroups_2024-Update
Solyc06g065680 No alias cyclin A2 0.03 Orthogroups_2024-Update
Solyc12g088470 No alias cyclin A3_4 0.04 Orthogroups_2024-Update
Solyc12g088500 No alias cyclin A3_5 0.06 Orthogroups_2024-Update
Solyc12g088530 No alias cyclin A3.1 0.04 Orthogroups_2024-Update
Sopen07g034810 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006671 Cyclin_N 88 216
IPR004367 Cyclin_C-dom 219 341
No external refs found!