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  5. Sopen12g030500

Sopen12g030500


Description : Cyclin, N-terminal domain


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g030500
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
97411 No alias Cyclin A1;1 0.02 Orthogroups_2024-Update
At1g15570 No alias CYCA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNJ4] 0.07 Orthogroups_2024-Update
At1g76310 No alias CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310] 0.02 Orthogroups_2024-Update
Glyma.06G043900 No alias CYCLIN A3;4 0.02 Orthogroups_2024-Update
HORVU4Hr1G013320.1 No alias regulatory protein *(CYCA) of cell cycle 0.04 Orthogroups_2024-Update
LOC_Os05g14730 No alias cyclin-A1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g31810 No alias cyclin, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00016804-RA No alias (at1g76310 : 214.0) core cell cycle genes; CYCLIN B2;4... 0.02 Orthogroups_2024-Update
PSME_00044357-RA No alias (at1g76310 : 301.0) core cell cycle genes; CYCLIN B2;4... 0.03 Orthogroups_2024-Update
Sobic.010G274000.3 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update
Solyc12g088500 No alias cyclin A3_5 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006671 Cyclin_N 88 216
IPR004367 Cyclin_C-dom 219 341
No external refs found!