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  5. Potri.018G068400

Potri.018G068400


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.018G068400
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
A4A49_28049 No alias putative pectinesterase 8 0.03 Orthogroups_2024-Update
A4A49_32955 No alias putative pectinesterase 53 0.03 Orthogroups_2024-Update
At1g05310 No alias Probable pectinesterase 8... 0.03 Orthogroups_2024-Update
Brara.J01617.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.02 Orthogroups_2024-Update
MA_10428610g0020 No alias (at5g19730 : 384.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Mp3g01170.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00000917-RA No alias (at1g05310 : 405.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00022041-RA No alias (at5g55590 : 238.0) Encodes a protein with pectin... 0.02 Orthogroups_2024-Update
Potri.001G364200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G015700 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
Potri.013G008100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s112_158V6 No alias pectinesterase ppe8b 0.03 Orthogroups_2024-Update
Pp1s23_141V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s67_6V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.9G259700.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sopen01g030950 No alias Pectinesterase 0.03 Orthogroups_2024-Update
Sopen12g003480 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 84 375
No external refs found!