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  5. Potri.018G106100

Potri.018G106100


Description : cyclic nucleotide gated channel 5


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.018G106100
Cluster HCCA clusters: cluster_0162

Target Alias Description ECC score Gene Family Method Actions
A4A49_22015 No alias putative cyclic nucleotide-gated ion channel 15 0.02 Orthogroups_2024-Update
A4A49_30061 No alias putative cyclic nucleotide-gated ion channel 14 0.03 Orthogroups_2024-Update
At2g46450 No alias Probable cyclic nucleotide-gated ion channel 12... 0.03 Orthogroups_2024-Update
GRMZM2G023534 No alias cyclic nucleotide-gated channel 14 0.04 Orthogroups_2024-Update
Glyma.17G073500 No alias cyclic nucleotide gated channel 5 0.03 Orthogroups_2024-Update
Seita.3G390700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 110 430
IPR000595 cNMP-bd_dom 526 614
No external refs found!