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  5. Sopen12g031420

Sopen12g031420


Description : AMP-binding enzyme


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g031420
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
173133 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
232017 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
A4A49_10638 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
A4A49_40482 No alias 4-coumarate--coa ligase 1 0.03 Orthogroups_2024-Update
A4A49_41306 No alias 4-coumarate--coa ligase 2 0.03 Orthogroups_2024-Update
At3g21230 No alias 4-coumarate--CoA ligase 4... 0.02 Orthogroups_2024-Update
Bradi5g04760 No alias acyl-CoA synthetase 5 0.02 Orthogroups_2024-Update
Brara.C03823.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Brara.C03824.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Brara.E01620.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
HORVU0Hr1G002720.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU0Hr1G018190.6 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_103893g0010 No alias (at1g20510 : 417.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00015569-RA No alias (o24146|4cl2_tobac : 689.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00016046-RA No alias (at1g20510 : 211.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00022177-RA No alias (o24146|4cl2_tobac : 717.0) 4-coumarate--CoA ligase 2... 0.04 Orthogroups_2024-Update
Pp1s12_59V6 No alias amp dependent 0.02 Orthogroups_2024-Update
Seita.9G306300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G537200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G516600.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Sobic.004G062500.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Solyc03g117870 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update
Solyc07g008360 No alias ribosomal protein L30/L7 family protein 0.04 Orthogroups_2024-Update
Solyc12g094520 No alias 4-coumarate--CoA ligase family protein (AHRD V3.3 ***... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 47 453
IPR025110 AMP-bd_C 462 537
No external refs found!