Sopen12g031510

Description : Armadillo/beta-catenin-like repeat

Gene families : OG_42_0000634 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000634_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g031510
Cluster	HCCA clusters: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
At5g42340	No alias	U-box domain-containing protein 15...	0.03	Orthogroups_2024-Update
Bradi4g22590	No alias	plant U-box 13	0.02	Orthogroups_2024-Update
Brara.I03267.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Pp1s148_106V6	No alias	cell death-related protein spl11	0.01	Orthogroups_2024-Update
Seita.9G452400.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Sobic.010G274100.1	No alias	E3 ubiquitin ligase *(PUB15)	0.01	Orthogroups_2024-Update
Solyc12g094610	No alias	U-box domain-containing 15-like protein (AHRD V3.3 ***...	0.13	Orthogroups_2024-Update
Sopen04g002720	No alias	Armadillo/beta-catenin-like repeat	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	269	339
IPR000225	Armadillo	392	431
IPR000225	Armadillo	475	513

External Links

No external refs found!