Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Populus release: Potri.018G152300 | |
Cluster | HCCA clusters: cluster_0059 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
106991 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
131170 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi1g05610 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi1g14160 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.05 | Orthogroups_2024-Update | |
Bradi1g56040 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi4g30190 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
Cre06.g298300 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Orthogroups_2024-Update | |
GRMZM2G000674 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G019689 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G020008 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G060536 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G144071 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G168378 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G430710 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G456114 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G091951 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.17G024900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.19G141800 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G093220.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
MA_25515g0010 | No alias | (at4g13650 : 660.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
MA_442926g0010 | No alias | (at4g13650 : 697.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00013800-RA | No alias | (at2g03880 : 405.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
Seita.3G075900.1 | No alias | RNA editing factor *(ECD1) | 0.04 | Orthogroups_2024-Update | |
Seita.5G176900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.7G131800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.9G355700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.001G025800.1 | No alias | RNA editing factor *(CRR22) | 0.02 | Orthogroups_2024-Update | |
Sobic.001G149100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.001G151300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.001G212200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.002G358900.3 | No alias | RNA editing factor *(OTP90) | 0.02 | Orthogroups_2024-Update | |
Sobic.002G389200.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.003G030100.1 | No alias | RNA editing factor *(CWM1) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G047400.1 | No alias | RNA editing factor *(OTP81) | 0.02 | Orthogroups_2024-Update | |
Sobic.003G142400.2 | No alias | RNA editing factor *(PGN) | 0.04 | Orthogroups_2024-Update | |
Sobic.004G051600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G141600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.006G069100.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.007G208400.1 | No alias | RNA editing factor *(REME1) | 0.02 | Orthogroups_2024-Update | |
Sobic.008G009000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.009G079400.1 | No alias | RNA editing factor *(ECD1) | 0.02 | Orthogroups_2024-Update | |
Sobic.009G155400.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.009G250700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.010G067000.1 | No alias | RNA editing factor *(MEF29) | 0.03 | Orthogroups_2024-Update | |
Sobic.010G153600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.010G258600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sopen02g024180 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen09g004550 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen11g001910 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen11g002630 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen11g006690 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
evm.model.tig00001038.5 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 584 | 708 |
IPR002885 | Pentatricopeptide_repeat | 209 | 235 |
IPR002885 | Pentatricopeptide_repeat | 413 | 439 |
IPR002885 | Pentatricopeptide_repeat | 283 | 304 |
IPR002885 | Pentatricopeptide_repeat | 312 | 337 |
IPR002885 | Pentatricopeptide_repeat | 181 | 205 |
IPR002885 | Pentatricopeptide_repeat | 384 | 409 |
IPR002885 | Pentatricopeptide_repeat | 107 | 136 |
IPR002885 | Pentatricopeptide_repeat | 448 | 475 |
No external refs found! |