Sopen12g032210

Description : WRKY DNA -binding domain

Gene families : OG_42_0000493 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g032210
Cluster	HCCA clusters: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
147026	No alias	WRKY DNA-binding protein 17	0.02	Orthogroups_2024-Update
Bradi5g04817	No alias	WRKY DNA-binding protein 11	0.01	Orthogroups_2024-Update
Brara.A00617.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F02907.1	No alias	WRKY-type transcription factor	0.05	Orthogroups_2024-Update
Glyma.17G239200	No alias	WRKY DNA-binding protein 7	0.02	Orthogroups_2024-Update
HORVU3Hr1G039500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os02g26430	No alias	WRKY42, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g21950	No alias	WRKY51, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g40570	No alias	WRKY94, expressed	0.02	Orthogroups_2024-Update
Potri.003G111900	No alias	WRKY DNA-binding protein 21	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018872	Zn-cluster-dom	208	254
IPR003657	WRKY_dom	258	314

External Links

No external refs found!

Sopen12g032210

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation