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  5. Sopen12g032260

Sopen12g032260


Description : Ring finger domain


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g032260
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
89607 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
A4A49_23702 No alias putative e3 ubiquitin-protein ligase hip1 0.06 Orthogroups_2024-Update
At5g24870 No alias At5g24870 [Source:UniProtKB/TrEMBL;Acc:Q8L775] 0.05 Orthogroups_2024-Update
Bradi5g24120 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.E02634.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.F00132.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.G00487.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G02303.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G053909 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G118344 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G103300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G075400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G241900 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G076600 No alias RING/U-box superfamily protein 0.07 Orthogroups_2024-Update
Glyma.09G180300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G051200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G158500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G138700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G198300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G180000 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G082970.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os01g49770 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G304900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G100100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Sobic.006G205100.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc03g118840 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1) 0.03 Orthogroups_2024-Update
Solyc12g088740 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2) 0.04 Orthogroups_2024-Update
Solyc12g096420 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G10650.2) 0.13 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 502 544
No external refs found!