Sopen12g032270

Description : Ubiquitin carboxyl-terminal hydrolase

Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g032270
Cluster	HCCA clusters: Cluster_300

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07781	No alias	ubiquitin carboxyl-terminal hydrolase 16	0.03	Orthogroups_2024-Update
At4g31670	No alias	Ubiquitin carboxyl-terminal hydrolase 18...	0.03	Orthogroups_2024-Update
Brara.F01198.1	No alias	deubiquitinase *(UBP15-21)	0.03	Orthogroups_2024-Update
Glyma.08G175500	No alias	ubiquitin-specific protease 25	0.02	Orthogroups_2024-Update
Glyma.15G248200	No alias	ubiquitin-specific protease 15	0.04	Orthogroups_2024-Update
Glyma.17G074200	No alias	ubiquitin-specific protease 23	0.02	Orthogroups_2024-Update
Kfl00030_0470	kfl00030_0470_v1.1	(at3g14400 : 269.0) Encodes a ubiquitin-specific...	0.02	Orthogroups_2024-Update
MA_2660871g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00012734-RA	No alias	(at2g24640 : 170.0) ubiquitin-specific protease 19...	0.02	Orthogroups_2024-Update
PSME_00027792-RA	No alias	(at2g24640 : 536.0) ubiquitin-specific protease 19...	0.04	Orthogroups_2024-Update
PSME_00034135-RA	No alias	(at5g57990 : 441.0) Encodes a ubiquitin-specific...	0.04	Orthogroups_2024-Update
Seita.1G350200.1	No alias	deubiquitinase *(UBP23)	0.02	Orthogroups_2024-Update
Seita.4G049200.1	No alias	deubiquitinase *(UBP23)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein-specific protease activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEA	InterProScan predictions
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	ubiquitinyl hydrolase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002893	Znf_MYND	7	44
IPR001394	Peptidase_C19_UCH	105	407

External Links

No external refs found!

Sopen12g032270

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation