1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.019G063400

Potri.019G063400


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.019G063400
Cluster HCCA clusters: cluster_0184

Target Alias Description ECC score Gene Family Method Actions
A4A49_00769 No alias reticuline oxidase-like protein 0.03 Orthogroups_2024-Update
At1g30710 No alias Berberine bridge enzyme-like 9... 0.03 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Bradi4g18970 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Brara.D02108.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.E00947.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.G00508.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.06 Orthogroups_2024-Update
Brara.I01843.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I01844.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I02779.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I03113.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.08G059000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080100 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.05 Orthogroups_2024-Update
Glyma.08G112600 No alias FAD-binding Berberine family protein 0.05 Orthogroups_2024-Update
Glyma.09G027300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
LOC_Os06g35650 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g35700 No alias reticuline oxidase-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g30310 No alias reticuline oxidase-like protein precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_162773g0010 No alias (at4g20860 : 377.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
MA_613919g0010 No alias (at5g44390 : 411.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
Potri.001G459100 No alias FAD-binding Berberine family protein 0.05 Orthogroups_2024-Update
Potri.001G459500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G160900 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G163000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Sobic.010G162700.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Sobic.010G163000.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Solyc02g070060 No alias FAD-binding Berberine family protein, putative (AHRD... 0.02 Orthogroups_2024-Update
Solyc02g070110 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc02g070130 No alias No description available 0.02 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.04 Orthogroups_2024-Update
Solyc03g006690 No alias LOW QUALITY:FAD-binding Berberine family protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen02g019230 No alias FAD binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012951 BBE 472 538
IPR006094 Oxid_FAD_bind_N 79 217
No external refs found!