Potri.019G085100

Description : rRNA processing protein-related

Gene families : OG_42_0005742 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005742_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.019G085100
Cluster	HCCA clusters: cluster_0096

Target	Alias	Description	ECC score	Gene Family Method
Cre13.g587000	No alias	rRNA processing protein-related	0.03	Orthogroups_2024-Update
HORVU5Hr1G043130.4	No alias	Unknown function	0.02	Orthogroups_2024-Update
Kfl00148_0040	kfl00148_0040_v1.1	(at5g61330 : 143.0) rRNA processing protein-related;...	0.01	Orthogroups_2024-Update
Mp1g01250.1	No alias	no hits & (original description: none)	0.02	Orthogroups_2024-Update
Sobic.003G109900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
evm.model.contig_567.2	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025160	AATF	113	249
IPR012617	AATF_C	328	403

External Links

No external refs found!