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  5. Potri.019G093900

Potri.019G093900


Description : homolog of carrot EP3-3 chitinase


Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.019G093900
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
426710 No alias Chitinase family protein 0.03 Orthogroups_2024-Update
Mp4g23630.1 No alias no description available(sp|q949h3|chi1_hevbr : 199.0) 0.02 Orthogroups_2024-Update
PSME_00013237-RA No alias (at2g43590 : 207.0) Chitinase family protein; FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00041155-RA No alias (at3g54420 : 236.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
Solyc04g072000 No alias Chitinase (AHRD V3.3 *** A0A1B1HY32_9APIA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
MF GO:0008061 chitin binding IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 78 223
IPR000726 Glyco_hydro_19_cat 229 274
IPR001002 Chitin-bd_1 26 59
No external refs found!