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  5. Sopen12g032730

Sopen12g032730


Description : NB-ARC domain


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g032730
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
A4A49_07896 No alias putative late blight resistance protein-like r1b-12 0.03 Orthogroups_2024-Update
Bradi1g29435 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Brara.F02968.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J01451.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G167049 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Glyma.18G269500 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
HORVU3Hr1G001510.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G003810.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g09430 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g12320 No alias disease resistance protein RPM1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g14330 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
Potri.003G099150 No alias NB-ARC domain-containing disease resistance protein 0.02 Orthogroups_2024-Update
Seita.8G088200.1 No alias DLSV protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.006G168500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g009690 No alias LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc10g047320 No alias Disease resistance protein (CC-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Solyc11g069020 No alias Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 0.03 Orthogroups_2024-Update
Sopen10g004080 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 161 389
No external refs found!