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  5. Potri.019G130100

Potri.019G130100


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.019G130100
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
At1g20823 No alias RING-H2 finger protein ATL80... 0.03 Orthogroups_2024-Update
At4g10150 No alias RING-H2 finger protein ATL7... 0.03 Orthogroups_2024-Update
Brara.I03307.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Cre11.g476250 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.01 Orthogroups_2024-Update
GRMZM2G015409 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G264800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G150400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G264300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g11460 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g15000 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_19072g0010 No alias (at5g17600 : 137.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Sobic.003G299800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.009G110500.2 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g066430 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G47560.1) 0.02 Orthogroups_2024-Update
Sopen11g002340 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.contig_2102.17 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 158
No external refs found!