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  5. Sopen12g033380

Sopen12g033380


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g033380
Cluster HCCA clusters: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
At2g18300 No alias Basic helix-loop-helix (BHLH) DNA-binding superfamily... 0.04 Orthogroups_2024-Update
Brara.B03444.1 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
GRMZM2G092091 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G141200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G165700 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G156900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
PSME_00019949-RA No alias (at1g68920 : 206.0) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
PSME_00044409-RA No alias (at1g68920 : 179.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
Potri.004G156000 No alias cryptochrome-interacting basic-helix-loop-helix 1 0.03 Orthogroups_2024-Update
Pp1s226_51V6 No alias dna binding 0.02 Orthogroups_2024-Update
Solyc04g005220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 99 146
No external refs found!