Potri.T044800

Description : NB-ARC domain-containing disease resistance protein

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.T044800
Cluster	HCCA clusters: cluster_0160

Target	Alias	Description	ECC score	Gene Family Method
At1g12210	No alias	Disease resistance protein RFL1...	0.03	Orthogroups_2024-Update
Bradi5g15560	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
MA_53162g0020	No alias	(at5g43740 : 114.0) Disease resistance protein...	0.02	Orthogroups_2024-Update
MA_8400299g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00021517-RA	No alias	(at1g12210 : 150.0) RFL1 has high sequence similarity to...	0.02	Orthogroups_2024-Update
PSME_00033120-RA	No alias	(at1g63350 : 267.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
PSME_00034448-RA	No alias	(at1g12220 : 195.0) Resistance gene, mediates resistance...	0.01	Orthogroups_2024-Update
Potri.019G002800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T026800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	552	607
IPR002182	NB-ARC	176	412

External Links

No external refs found!