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  5. Sopen12g033670

Sopen12g033670


Description : Region found in RelA / SpoT proteins


Gene families : OG_42_0005202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g033670
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Brara.C03662.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Cre03.g208721 No alias Ca2+-activated RelA/spot homolog 0.01 Orthogroups_2024-Update
Glyma.13G119600 No alias Ca2+-activated RelA/spot homolog 0.06 Orthogroups_2024-Update
HORVU1Hr1G023690.1 No alias ppGpp synthetase *(CRSH) 0.03 Orthogroups_2024-Update
LOC_Os05g06890 No alias relA-SpoT like protein RSH4, putative, expressed 0.04 Orthogroups_2024-Update
Mp1g27830.1 No alias Probable GTP diphosphokinase CRSH, chloroplastic... 0.02 Orthogroups_2024-Update
Pp1s7_442V6 No alias guanosine-3 -bis 3 - 0.03 Orthogroups_2024-Update
Seita.7G270900.1 No alias ppGpp synthetase *(CRSH) 0.05 Orthogroups_2024-Update
Sobic.009G054900.1 No alias ppGpp synthetase *(CRSH) 0.04 Orthogroups_2024-Update
Solyc12g098920 No alias RelA-SpoT like protein RSH4 (AHRD V3.3 *** Q84LE6_TOBAC) 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
BP GO:0015969 guanosine tetraphosphate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003607 HD/PDEase_dom 110 246
IPR002048 EF_hand_dom 479 531
IPR007685 RelA_SpoT 313 435
No external refs found!