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  5. Potri.T053000

Potri.T053000


Description : NB-ARC domain-containing disease resistance protein


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.T053000
Cluster HCCA clusters: cluster_0185

Target Alias Description ECC score Gene Family Method Actions
PSME_00050940-RA No alias (at1g12280 : 221.0) LRR and NB-ARC domains-containing... 0.02 Orthogroups_2024-Update
PSME_00056264-RA No alias (at1g63350 : 266.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
Potri.001G313301 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Potri.T015900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.5G286600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G165000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g007790 No alias LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 871 929
IPR002182 NB-ARC 502 731
No external refs found!