Potri.T065600

Description : ortholog of maize chloroplast splicing factor CRS1

Gene families : OG_42_0000921 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000921_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.T065600
Cluster	HCCA clusters: cluster_0024

Target	Alias	Description	ECC score	Gene Family Method
Glyma.20G205000	No alias	CRM family member 3A	0.03	Orthogroups_2024-Update
LOC_Os05g47850	No alias	chloroplastic group IIA intron splicing facilitator...	0.02	Orthogroups_2024-Update
Sopen02g030880	No alias	CRS1 / YhbY (CRM) domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	2	48
IPR001890	RNA-binding_CRM	150	234
IPR001890	RNA-binding_CRM	360	447

External Links

No external refs found!