Solyc03g007380

Description : WRKY transcription factor 52

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc03g007380
Cluster	HCCA clusters: Cluster_172

Target	Alias	Description	ECC score	Gene Family Method
69431	No alias	WRKY DNA-binding protein 57	0.04	Orthogroups_2024-Update
81371	No alias	WRKY DNA-binding protein 9	0.02	Orthogroups_2024-Update
A4A49_07696	No alias	putative wrky transcription factor 33	0.04	Orthogroups_2024-Update
A4A49_10130	No alias	putative wrky transcription factor 33	0.03	Orthogroups_2024-Update
A4A49_22277	No alias	putative wrky transcription factor 70	0.03	Orthogroups_2024-Update
A4A49_32819	No alias	putative wrky transcription factor 31	0.02	Orthogroups_2024-Update
A4A49_37904	No alias	putative wrky transcription factor 12	0.02	Orthogroups_2024-Update
At1g69810	No alias	At1g69810 [Source:UniProtKB/TrEMBL;Acc:Q058I4]	0.03	Orthogroups_2024-Update
At2g40750	No alias	Probable WRKY transcription factor 54...	0.02	Orthogroups_2024-Update
At2g44745	No alias	At2g44745 [Source:UniProtKB/TrEMBL;Acc:Q1PEU5]	0.04	Orthogroups_2024-Update
At4g39410	No alias	WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]	0.04	Orthogroups_2024-Update
Bradi1g08106	No alias	WRKY DNA-binding protein 57	0.05	Orthogroups_2024-Update
Bradi2g00280	No alias	WRKY DNA-binding protein 26	0.02	Orthogroups_2024-Update
Bradi2g08620	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Bradi2g15877	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi2g22440	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Bradi4g25717	No alias	WRKY DNA-binding protein 55	0.02	Orthogroups_2024-Update
Brara.B00978.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B02409.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B03587.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H01332.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I01929.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K00205.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G012724	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
GRMZM2G057116	No alias	WRKY DNA-binding protein 50	0.03	Orthogroups_2024-Update
GRMZM2G169966	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
Glyma.03G220100	No alias	WRKY DNA-binding protein 35	0.04	Orthogroups_2024-Update
Glyma.03G224700	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.15G003300	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
HORVU0Hr1G012750.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU1Hr1G092130.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU2Hr1G029450.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU3Hr1G060500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G049130.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g46800	No alias	WRKY15, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g04640	No alias	WRKY5, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g45230	No alias	WRKY58, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g48260	No alias	WRKY47, expressed	0.03	Orthogroups_2024-Update
LOC_Os11g29870	No alias	WRKY72, expressed	0.03	Orthogroups_2024-Update
MA_10425932g0020	No alias	(at5g13080 : 160.0) WRKY75 is one of several...	0.04	Orthogroups_2024-Update
MA_11072g0010	No alias	(at1g68150 : 82.4) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_175750g0010	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.02	Orthogroups_2024-Update
Mp7g17200.1	No alias	transcription factor (WRKY)	0.02	Orthogroups_2024-Update
PSME_00008606-RA	No alias	(at5g56270 : 338.0) WRKY transcription factor 2; WRKY...	0.03	Orthogroups_2024-Update
PSME_00024308-RA	No alias	(at3g01970 : 113.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00024309-RA	No alias	(at3g01970 : 84.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00028886-RA	No alias	(at5g15130 : 207.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.001G092900	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.003G138600	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.003G182200	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Potri.004G007500	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.005G085200	No alias	WRKY DNA-binding protein 51	0.04	Orthogroups_2024-Update
Potri.011G007800	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.017G104800	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
Pp1s25_173V6	No alias	wrky11 - superfamily of tfs having wrky and zinc finger domains	0.03	Orthogroups_2024-Update
Seita.1G334400.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G054500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G174300.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G037400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G065900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G117600.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.005G117400.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G118301.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G068900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G092100.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G171600.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc03g116890	No alias	WRKY transcription factor 39	0.03	Orthogroups_2024-Update
Sopen01g039380	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen10g005350	No alias	hypothetical protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
BP	GO:0006415	translational termination	IEP	Predicted GO
BP	GO:0006808	regulation of nitrogen utilization	IEP	Predicted GO
MF	GO:0008079	translation termination factor activity	IEP	Predicted GO
MF	GO:0016149	translation release factor activity, codon specific	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
BP	GO:0022411	cellular component disassembly	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
BP	GO:0032984	protein-containing complex disassembly	IEP	Predicted GO
BP	GO:0043624	cellular protein complex disassembly	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	142	201

External Links

No external refs found!

Solyc03g007380

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation