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  5. Potri.T101400

Potri.T101400


Description : AGAMOUS-like 62


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.T101400
Cluster HCCA clusters: cluster_0160

Target Alias Description ECC score Gene Family Method Actions
A4A49_15806 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_18078 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_19521 No alias developmental protein sepallata 1 0.03 Orthogroups_2024-Update
A4A49_39464 No alias agamous-like mads-box protein agl8 0.03 Orthogroups_2024-Update
At1g01530 No alias AGL28 [Source:UniProtKB/TrEMBL;Acc:A0A178WE04] 0.03 Orthogroups_2024-Update
At1g22130 No alias Agamous-like MADS-box protein AGL104... 0.03 Orthogroups_2024-Update
At4g11880 No alias Agamous-like MADS-box protein AGL14... 0.04 Orthogroups_2024-Update
Bradi1g08340 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi2g57000 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.C00925.1 No alias component *(PISTILLATA) of AP3-PISTILLATA organ-identity... 0.05 Orthogroups_2024-Update
Brara.E00310.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G133568 No alias AGAMOUS-like 16 0.03 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Glyma.02G179300 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Glyma.02G216600 No alias AGAMOUS-like 16 0.03 Orthogroups_2024-Update
Glyma.03G019300 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.04 Orthogroups_2024-Update
Glyma.13G223300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.17G081200 No alias AGAMOUS-like 8 0.04 Orthogroups_2024-Update
Glyma.20G136600 No alias AGAMOUS-like 62 0.05 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G002270.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G054390.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g36924 No alias OsMADS27 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
MA_17919g0010 No alias (q6eu39|mads6_orysa : 111.0) MADS-box transcription... 0.02 Orthogroups_2024-Update
Mp4g11760.1 No alias transcription factor (MADS/AGL) 0.02 Orthogroups_2024-Update
Mp4g12490.1 No alias transcription factor (MADS/AGL) 0.02 Orthogroups_2024-Update
PSME_00042195-RA No alias (at2g45660 : 177.0) Controls flowering and is required... 0.04 Orthogroups_2024-Update
Potri.001G284301 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.04 Orthogroups_2024-Update
Potri.009G084200 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.015G134800 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Seita.3G073000.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g089210 No alias MADS box transcription factor (AHRD V3.3 *** Q689E7_GENTR) 0.03 Orthogroups_2024-Update
Solyc03g114840 No alias MADS-box protein 1 0.03 Orthogroups_2024-Update
Sopen02g033990 No alias SRF-type transcription factor (DNA-binding and... 0.02 Orthogroups_2024-Update
Sopen06g026710 No alias K-box region 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 22 68
No external refs found!