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  5. Sopen12g034510

Sopen12g034510


Description : SDA1


Gene families : OG_42_0006997 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g034510
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
At1g13160 No alias ARM repeat superfamily protein... 0.06 Orthogroups_2024-Update
Bradi5g22790 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
Brara.I05045.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Cre06.g277050 No alias ARM repeat superfamily protein 0.07 Orthogroups_2024-Update
GRMZM2G121074 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G108050.4 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00311_0100 kfl00311_0100_v1.1 (at1g13160 : 363.0) ARM repeat superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.008G182900 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
Pp1s286_15V6 No alias sda1 domain containing 1 0.06 Orthogroups_2024-Update
Seita.7G248800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G226300.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Solyc12g099890 No alias Protein SDA1 like (AHRD V3.3 *** A0A0B2SJ94_GLYSO) 0.05 Orthogroups_2024-Update
evm.model.contig_2068.25 No alias (at1g13160 : 220.0) ARM repeat superfamily protein;... 0.02 Orthogroups_2024-Update
evm.model.tig00000545.36 No alias (at1g13160 : 272.0) ARM repeat superfamily protein;... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012977 Uncharacterised_NUC130/133_N 92 143
IPR007949 SDA1_dom 453 809
No external refs found!