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  5. Sopen12g034600

Sopen12g034600


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g034600
Cluster HCCA clusters: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G042100 No alias receptor like protein 7 0.02 Orthogroups_2024-Update
HORVU3Hr1G111090.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g07280 No alias disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g11510 No alias hcr2-0B, putative, expressed 0.02 Orthogroups_2024-Update
Solyc05g012430 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 431 468
IPR013210 LRR_N_plant-typ 121 159
IPR013210 LRR_N_plant-typ 2 14
IPR001611 Leu-rich_rpt 525 546
IPR001611 Leu-rich_rpt 572 631
IPR001611 Leu-rich_rpt 356 415
IPR001611 Leu-rich_rpt 733 791
IPR001611 Leu-rich_rpt 210 225
No external refs found!