1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g007460

Solyc03g007460


Description : Solanum lycopersicum Cytokinin Response Factor 4


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g007460
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
At1g01250 No alias Ethylene-responsive transcription factor ERF023... 0.03 Orthogroups_2024-Update
At4g25490 No alias DRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3] 0.03 Orthogroups_2024-Update
Bradi2g29960 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g60340 No alias C-repeat/DRE binding factor 2 0.02 Orthogroups_2024-Update
Bradi3g24000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00159.1 No alias subgroup ERF-II-DEAR transcription factor 0.02 Orthogroups_2024-Update
Brara.E00145.1 No alias subgroup ERF-VI transcription factor & transcription... 0.03 Orthogroups_2024-Update
GRMZM2G018398 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Glyma.13G088100 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Glyma.19G026000 No alias related to AP2 11 0.03 Orthogroups_2024-Update
LOC_Os02g52670 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s340_16V6 No alias ethylene-responsive transcription 0.04 Orthogroups_2024-Update
Sopen03g002330 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen07g027720 No alias AP2 domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 128 177
No external refs found!