1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen12g034770

Sopen12g034770


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000702_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g034770
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_28561 No alias transcription factor bhlh130 0.03 Orthogroups_2024-Update
At1g05805 No alias Transcription factor bHLH128... 0.02 Orthogroups_2024-Update
GRMZM2G153454 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G152500 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G204400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
PSME_00024677-RA No alias (at2g42280 : 162.0) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
Solyc10g079050 No alias BHLH transcription factor o95 0.03 Orthogroups_2024-Update
Solyc11g056650 No alias bHLH transcription factor 096 0.07 Orthogroups_2024-Update
Solyc12g100140 No alias Basic helix-loop-helix (BHLH) DNA-binding superfamily... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 385 430
No external refs found!