Potri.T170900

Description : Pectin lyase-like superfamily protein

Gene families : OG_42_0000668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.T170900
Cluster	HCCA clusters: cluster_0081

Target	Alias	Description	ECC score	Gene Family Method
At1g05650	No alias	F3F20.10 protein [Source:UniProtKB/TrEMBL;Acc:Q9SYK6]	0.04	Orthogroups_2024-Update
At1g65570	No alias	F5I14.10 [Source:UniProtKB/TrEMBL;Acc:O04474]	0.03	Orthogroups_2024-Update
At2g43890	No alias	Pectin lyase-like superfamily protein...	0.03	Orthogroups_2024-Update
GRMZM2G452150	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G144100	No alias	Pectin lyase-like superfamily protein	0.04	Orthogroups_2024-Update
Potri.017G006700	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	57	381

External Links

No external refs found!