Sopen12g034960

Description : C-5 cytosine-specific DNA methylase

Gene families : OG_42_0002722 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g034960
Cluster	HCCA clusters: Cluster_327

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g66167	No alias	chromomethylase 2	0.02	Orthogroups_2024-Update
Glyma.01G160300	No alias	chromomethylase 1	0.02	Orthogroups_2024-Update
Kfl00108_0130	kfl00108_0130_v1.1	(q8lpu5\|cmt3_maize : 469.0) DNA...	0.02	Orthogroups_2024-Update
Seita.9G300300.1	No alias	DNA chromomethylase *(CMT)	0.02	Orthogroups_2024-Update
Solyc01g006100	No alias	cytosine-5 DNA methyltransferase1L	0.05	Orthogroups_2024-Update
Solyc12g100330	No alias	cytosine-5 DNA methyltransferase3L	0.04	Orthogroups_2024-Update
Sopen01g002100	No alias	C-5 cytosine-specific DNA methylase	0.03	Orthogroups_2024-Update
Sopen08g001440	No alias	C-5 cytosine-specific DNA methylase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	IEA	InterProScan predictions
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001525	C5_MeTfrase	549	878
IPR001025	BAH_dom	223	329
IPR023780	Chromo_domain	484	538

External Links

No external refs found!