1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.T171900

Potri.T171900


Description : cytochrome BC1 synthesis


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.T171900
Cluster HCCA clusters: cluster_0127

Target Alias Description ECC score Gene Family Method Actions
75451 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
A4A49_03924 No alias aaa-atpase 0.05 Orthogroups_2024-Update
A4A49_15221 No alias protein hyper-sensitivity-related 4 0.03 Orthogroups_2024-Update
A4A49_33756 No alias protein hyper-sensitivity-related 4 0.05 Orthogroups_2024-Update
A4A49_34713 No alias aaa-atpase asd, mitochondrial 0.03 Orthogroups_2024-Update
At1g43910 No alias AAA-ATPase At1g43910 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP11] 0.03 Orthogroups_2024-Update
Bradi1g54800 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
Bradi4g00467 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
Bradi4g30930 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Brara.J00672.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G138770 No alias AAA-ATPase 1 0.05 Orthogroups_2024-Update
GRMZM2G180080 No alias cytochrome BC1 synthesis 0.04 Orthogroups_2024-Update
GRMZM5G893912 No alias AAA-ATPase 1 0.05 Orthogroups_2024-Update
Glyma.01G171400 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Glyma.12G229000 No alias cytochrome BC1 synthesis 0.04 Orthogroups_2024-Update
Glyma.13G066100 No alias AAA-ATPase 1 0.04 Orthogroups_2024-Update
Glyma.18G254100 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
HORVU1Hr1G063390.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G046180.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G000640.4 No alias Unknown function 0.06 Orthogroups_2024-Update
Kfl00241_0050 kfl00241_0050_v1.1 (at3g50940 : 120.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
MA_10426157g0010 No alias (at4g25835 : 328.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
MA_10435468g0010 No alias (at3g28510 : 210.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
MA_296237g0010 No alias (at5g57480 : 91.7) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
MA_5780742g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_69227g0010 No alias (at5g57480 : 537.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
PSME_00011756-RA No alias (at4g30250 : 363.0) P-loop containing nucleoside... 0.05 Orthogroups_2024-Update
PSME_00029894-RA No alias (at5g57480 : 373.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
Potri.008G177200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Seita.2G213800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G407200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G218000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G394700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G051600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G361900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G067000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.002G319900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G235300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G191300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc03g033840 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
Solyc04g080680 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Solyc05g015060 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Solyc10g007280 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Sopen02g018900 No alias ATPase family associated with various cellular activities (AAA) 0.02 Orthogroups_2024-Update
Sopen03g006560 No alias Domain associated at C-terminal with AAA 0.02 Orthogroups_2024-Update
Sopen05g003350 No alias Domain associated at C-terminal with AAA 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 45 137
IPR003959 ATPase_AAA_core 265 402
No external refs found!