Sopen12g035030


Description : Calpain family cysteine protease


Gene families : OG_42_0004065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g035030
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
236021 No alias calpain-type cysteine protease family 0.02 Orthogroups_2024-Update
Bradi3g53020 No alias calpain-type cysteine protease family 0.05 Orthogroups_2024-Update
HORVU6Hr1G069450.1 No alias C2-class (Phytocalpain) calcium-activated protease 0.06 Orthogroups_2024-Update
MA_129368g0010 No alias (at1g55350 : 1456.0) Similar to maize DEK1, a gene... 0.04 Orthogroups_2024-Update
Mp2g12820.1 No alias calcium-activated protease (Phytocalpain) 0.02 Orthogroups_2024-Update
Seita.9G434900.1 No alias C2-class (Phytocalpain) calcium-activated protease 0.03 Orthogroups_2024-Update
Sobic.001G400500.1 No alias C2-class (Phytocalpain) calcium-activated protease 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001300 Peptidase_C2_calpain_cat 1687 1986
IPR022682 Calpain_domain_III 1998 2135
No external refs found!