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  5. At1g01030

At1g01030


Description : NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]


Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g01030
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Brara.C03374.1 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J00079.1 No alias RAV/NGATHA-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G082227 No alias AP2/B3-like transcriptional factor family protein 0.04 Orthogroups_2024-Update
GRMZM2G159592 No alias related to ABI3/VP1 1 0.03 Orthogroups_2024-Update
Glyma.01G087500 No alias AP2/B3 transcription factor family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G082030.2 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.05 Orthogroups_2024-Update
LOC_Os01g04800 No alias B3 DNA binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_246350g0010 No alias (at1g13260 : 168.0) Encodes an AP2/B3 domain... 0.03 Orthogroups_2024-Update
PSME_00048986-RA No alias (at1g25560 : 246.0) Encodes a member of the RAV... 0.03 Orthogroups_2024-Update
Seita.9G562700.1 No alias RAV/NGATHA-type transcription factor 0.05 Orthogroups_2024-Update
Sopen08g004540 No alias B3 DNA binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 56 159
No external refs found!