AC155434.2_FG006

Description : cycling DOF factor 3

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: AC155434.2_FG006
Cluster	HCCA clusters: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method
89924	No alias	cycling DOF factor 1	0.04	Orthogroups_2024-Update
A4A49_13356	No alias	cyclic dof factor 3	0.02	Orthogroups_2024-Update
A4A49_15151	No alias	dof zinc finger protein dof2.4	0.03	Orthogroups_2024-Update
A4A49_26058	No alias	dof zinc finger protein dof4.6	0.02	Orthogroups_2024-Update
At2g34140	No alias	Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]	0.04	Orthogroups_2024-Update
At2g37590	No alias	Dof zinc finger protein DOF2.4...	0.03	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.03	Orthogroups_2024-Update
Bradi1g17410	No alias	cycling DOF factor 3	0.05	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Bradi3g51510	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Brara.H02152.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.05G018100	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Glyma.05G158200	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.06G124300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.07G229600	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.15G022800	No alias	DOF zinc finger protein 1	0.02	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
HORVU2Hr1G119110.4	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
HORVU7Hr1G043250.2	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.04	Orthogroups_2024-Update
Mp2g20790.1	No alias	transcription factor (DOF)	0.03	Orthogroups_2024-Update
PSME_00004776-RA	No alias	(at5g60850 : 127.0) Encodes a zinc finger protein.; OBF...	0.03	Orthogroups_2024-Update
Potri.002G129600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Potri.008G055100	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Potri.011G047500	No alias	OBF binding protein 4	0.05	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Pp1s37_7V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.2G326900.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Seita.4G124800.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.001G206300.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.002G313800.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.03	Orthogroups_2024-Update
Solyc02g088070	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA)	0.03	Orthogroups_2024-Update
Solyc03g115940	No alias	Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA)	0.02	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.03	Orthogroups_2024-Update
Solyc06g069760	No alias	Dof zinc finger protein 22	0.03	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Predicted GO
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Predicted GO
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Predicted GO
BP	GO:0006333	chromatin assembly or disassembly	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
MF	GO:0008066	glutamate receptor activity	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
MF	GO:0022824	transmitter-gated ion channel activity	IEP	Predicted GO
MF	GO:0022834	ligand-gated channel activity	IEP	Predicted GO
MF	GO:0022835	transmitter-gated channel activity	IEP	Predicted GO
MF	GO:0030594	neurotransmitter receptor activity	IEP	Predicted GO
MF	GO:0038023	signaling receptor activity	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
MF	GO:0060089	molecular transducer activity	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	70	126

External Links

No external refs found!

AC155434.2_FG006

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation