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At1g01670


Description : U-box domain-containing protein 56 [Source:UniProtKB/Swiss-Prot;Acc:Q8GXQ7]


Gene families : OG_42_0011647 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011647_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g01670
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Brara.J00028.1 No alias E3 ubiquitin protein ligase *(PUB32) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0034508 centromere complex assembly IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 295 364
No external refs found!