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At1g02460


Description : At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]


Gene families : OG_42_0002108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g02460
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G222500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G156600.1 No alias polygalacturonase *(PGX3-like) & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc01g079130 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT1G02460.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019211 phosphatase activator activity IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 122 441
No external refs found!