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  5. At1g02800

At1g02800


Description : Endoglucanase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRX3]


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g02800
Cluster HCCA clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
234652 No alias glycosyl hydrolase 9C2 0.03 Orthogroups_2024-Update
Bradi2g11870 No alias glycosyl hydrolase 9B13 0.02 Orthogroups_2024-Update
Bradi4g35970 No alias glycosyl hydrolase 9B18 0.02 Orthogroups_2024-Update
PSME_00024716-RA No alias (at3g43860 : 455.0) glycosyl hydrolase 9A4 (GH9A4);... 0.04 Orthogroups_2024-Update
Pp1s308_21V6 No alias endo- -beta- 0.02 Orthogroups_2024-Update
Solyc04g081300 No alias Endoglucanase (AHRD V3.3 *** K4BVK9_SOLLC) 0.03 Orthogroups_2024-Update
Sopen11g018340 No alias Glycosyl hydrolase family 9 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 44 495
No external refs found!