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  5. AC196426.3_FG007

AC196426.3_FG007


Description : Root hair defective 3 GTP-binding protein (RHD3)


Gene families : OG_42_0001033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC196426.3_FG007
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
73603 No alias Root hair defective 3 GTP-binding protein (RHD3) 0.03 Orthogroups_2024-Update
Cre10.g439600 No alias Root hair defective 3 GTP-binding protein (RHD3) 0.02 Orthogroups_2024-Update
Glyma.08G193200 No alias Root hair defective 3 GTP-binding protein (RHD3) 0.03 Orthogroups_2024-Update
Kfl00614_0020 kfl00614_0020_v1.1 (at3g13870 : 803.0) required for regulated cell... 0.03 Orthogroups_2024-Update
Seita.1G164100.1 No alias ER tubulae formation factor *(RHD3/RL) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR008803 RHD3/Sey1 56 711
No external refs found!