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  5. AC197578.4_FG001

AC197578.4_FG001


Description : Glycosyl hydrolase family protein


Gene families : OG_42_0000439 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000439_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: AC197578.4_FG001
Cluster HCCA clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
74114 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G073280.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Pp1s217_8V6 No alias glycosyl hydrolase family 3 n terminal domain containing... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 361 568
IPR001764 Glyco_hydro_3_N 252 324
IPR001764 Glyco_hydro_3_N 25 251
No external refs found!