1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g04840

At1g04840


Description : Pentatricopeptide repeat-containing protein At1g04840 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAT2]


Gene families : OG_42_0012199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012199_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g04840
Cluster HCCA clusters: Cluster_59


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 361 389
IPR002885 Pentatricopeptide_repeat 332 357
IPR002885 Pentatricopeptide_repeat 198 226
IPR002885 Pentatricopeptide_repeat 166 186
IPR002885 Pentatricopeptide_repeat 433 456
IPR002885 Pentatricopeptide_repeat 256 305
IPR032867 DYW_dom 533 655
No external refs found!