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  5. Solyc03g007960

Solyc03g007960


Description : beta-carotene hydroxylase-2


Gene families : OG_42_0002239 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g007960
Cluster HCCA clusters: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
At5g52570 No alias Beta-carotene 3-hydroxylase 2, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g76870 No alias beta-hydroxylase 1 0.04 Orthogroups_2024-Update
Pp1s19_96V6 No alias beta-carotene hydroxylase 0.02 Orthogroups_2024-Update
Sobic.006G188200.2 No alias carotenoid beta ring hydroxylase 0.03 Orthogroups_2024-Update
Sopen03g003900 No alias Fatty acid hydroxylase superfamily 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
BP GO:0006633 fatty acid biosynthetic process IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 157 284
No external refs found!