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  5. At1g05230

At1g05230


Description : AT1G05230 protein [Source:UniProtKB/TrEMBL;Acc:B9DFH8]


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g05230
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
At1g73360 No alias Homeobox-leucine zipper protein HDG11... 0.04 Orthogroups_2024-Update
At2g32370 No alias Homeobox-leucine zipper protein HDG3... 0.04 Orthogroups_2024-Update
At4g17710 No alias Homeobox-leucine zipper protein HDG4... 0.06 Orthogroups_2024-Update
At5g46880 No alias Homeobox-leucine zipper protein HDG5... 0.04 Orthogroups_2024-Update
Brara.B00705.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G02319.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
Brara.J00761.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G386276 No alias protodermal factor 2 0.02 Orthogroups_2024-Update
Glyma.08G057400 No alias homeodomain GLABROUS 11 0.02 Orthogroups_2024-Update
Glyma.12G212802 No alias protodermal factor 2 0.04 Orthogroups_2024-Update
LOC_Os04g53540 No alias homeobox and START domains containing protein, putative,... 0.05 Orthogroups_2024-Update
LOC_Os08g08820 No alias homeobox and START domains containing protein, putative,... 0.02 Orthogroups_2024-Update
MA_10433688g0010 No alias (at4g21750 : 540.0) Encodes a homeobox protein similar... 0.04 Orthogroups_2024-Update
MA_122121g0010 No alias (at4g00730 : 551.0) Encodes a homeodomain protein of the... 0.03 Orthogroups_2024-Update
Seita.6G039900.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G313900.1 No alias HD-ZIP IV-type transcription factor 0.05 Orthogroups_2024-Update
Solyc02g080260 No alias Woolly 0.02 Orthogroups_2024-Update
Sopen03g028900 No alias START domain 0.05 Orthogroups_2024-Update
Sopen06g015560 No alias START domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0090231 regulation of spindle checkpoint IEP Predicted GO
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP Predicted GO
BP GO:1901976 regulation of cell cycle checkpoint IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1903504 regulation of mitotic spindle checkpoint IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 65 120
IPR002913 START_lipid-bd_dom 252 465
No external refs found!